Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Dkk1O54908 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Dkk1O54908 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Dkk1O54908 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.64□□□□□ -0.39
Dkk1O54908 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Dkk1O54908 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.64□□□□□ -0.39
Dkk1O54908 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Dkk1O54908 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Dkk1O54908 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC12.63□□□□□ -0.39
Dkk1O54908 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Gm11745-201ENSMUST00000121669 448 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Mir1895-201ENSMUST00000122615 79 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.63□□□□□ -0.39
Dkk1O54908 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Dkk1O54908 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Gm27397-201ENSMUST00000184997 107 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Gm43664-201ENSMUST00000196038 734 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Gm4870-201ENSMUST00000198525 1251 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Gm18057-201ENSMUST00000208220 503 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Gm34099-201ENSMUST00000211592 704 ntTSL 5 BASIC12.63□□□□□ -0.39
Dkk1O54908 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Dkk1O54908 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Dkk1O54908 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Dkk1O54908 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Dkk1O54908 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Dkk1O54908 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Dkk1O54908 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Sybu-209ENSMUST00000228639 4113 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Carlr-201ENSMUST00000181515 2574 ntBASIC12.63□□□□□ -0.39
Dkk1O54908 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Dkk1O54908 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm5583-201ENSMUST00000174328 1519 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC12.62□□□□□ -0.39
Dkk1O54908 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Dkk1O54908 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.62□□□□□ -0.39
Dkk1O54908 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Dkk1O54908 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Dkk1O54908 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Dkk1O54908 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Dkk1O54908 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.62□□□□□ -0.39
Dkk1O54908 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm14550-201ENSMUST00000117918 407 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm14103-201ENSMUST00000119075 366 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.62□□□□□ -0.39
Dkk1O54908 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.62□□□□□ -0.39
Dkk1O54908 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm15057-201ENSMUST00000121516 534 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Gm16363-201ENSMUST00000132460 877 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms