Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Limk2O54785 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Limk2O54785 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Limk2O54785 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Limk2O54785 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.03□□□□□ -0.16
Limk2O54785 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.03□□□□□ -0.16
Limk2O54785 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.03□□□□□ -0.16
Limk2O54785 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.03□□□□□ -0.16
Limk2O54785 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.03□□□□□ -0.16
Limk2O54785 Gm13385-201ENSMUST00000121089 220 ntBASIC14.03□□□□□ -0.16
Limk2O54785 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Limk2O54785 Gm8927-201ENSMUST00000181978 981 ntBASIC14.03□□□□□ -0.16
Limk2O54785 Gm28760-201ENSMUST00000185995 736 ntBASIC14.03□□□□□ -0.16
Limk2O54785 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.03□□□□□ -0.16
Limk2O54785 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Gm9797-201ENSMUST00000052902 613 ntBASIC14.03□□□□□ -0.16
Limk2O54785 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Limk2O54785 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Limk2O54785 Gm3222-201ENSMUST00000071282 990 ntBASIC14.03□□□□□ -0.16
Limk2O54785 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.03□□□□□ -0.16
Limk2O54785 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.03□□□□□ -0.16
Limk2O54785 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.03□□□□□ -0.16
Limk2O54785 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.03□□□□□ -0.16
Limk2O54785 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Limk2O54785 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Limk2O54785 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Limk2O54785 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Limk2O54785 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Limk2O54785 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Limk2O54785 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.02□□□□□ -0.16
Limk2O54785 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Limk2O54785 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Limk2O54785 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.02□□□□□ -0.17
Limk2O54785 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.02□□□□□ -0.17
Limk2O54785 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.02□□□□□ -0.17
Limk2O54785 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Gm21854-201ENSMUST00000179901 471 ntBASIC14.02□□□□□ -0.17
Limk2O54785 Gm8602-201ENSMUST00000184045 607 ntBASIC14.02□□□□□ -0.17
Limk2O54785 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.02□□□□□ -0.17
Limk2O54785 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.02□□□□□ -0.17
Limk2O54785 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Limk2O54785 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.02□□□□□ -0.17
Limk2O54785 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Limk2O54785 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Limk2O54785 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Limk2O54785 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Limk2O54785 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Limk2O54785 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.01□□□□□ -0.17
Limk2O54785 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.01□□□□□ -0.17
Limk2O54785 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Limk2O54785 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Limk2O54785 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Limk2O54785 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Limk2O54785 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Limk2O54785 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Limk2O54785 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Limk2O54785 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Limk2O54785 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Limk2O54785 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.01□□□□□ -0.17
Limk2O54785 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms