Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sdc4O35988 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sdc4O35988 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.23□□□□□ -0.13
Sdc4O35988 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sdc4O35988 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.23□□□□□ -0.13
Sdc4O35988 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sdc4O35988 Gm15678-201ENSMUST00000117573 960 ntBASIC14.23□□□□□ -0.13
Sdc4O35988 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.23□□□□□ -0.13
Sdc4O35988 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.23□□□□□ -0.13
Sdc4O35988 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Sdc4O35988 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.23□□□□□ -0.13
Sdc4O35988 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Sdc4O35988 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.23□□□□□ -0.13
Sdc4O35988 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.23□□□□□ -0.13
Sdc4O35988 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.23□□□□□ -0.13
Sdc4O35988 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sdc4O35988 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.23□□□□□ -0.13
Sdc4O35988 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sdc4O35988 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sdc4O35988 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sdc4O35988 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sdc4O35988 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sdc4O35988 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sdc4O35988 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sdc4O35988 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.22□□□□□ -0.13
Sdc4O35988 Gm12485-201ENSMUST00000119641 291 ntBASIC14.22□□□□□ -0.13
Sdc4O35988 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.22□□□□□ -0.13
Sdc4O35988 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.22□□□□□ -0.13
Sdc4O35988 Gm43433-201ENSMUST00000196573 481 ntBASIC14.22□□□□□ -0.13
Sdc4O35988 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.22□□□□□ -0.13
Sdc4O35988 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.22□□□□□ -0.13
Sdc4O35988 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.22□□□□□ -0.13
Sdc4O35988 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.22□□□□□ -0.13
Sdc4O35988 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sdc4O35988 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.22□□□□□ -0.13
Sdc4O35988 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sdc4O35988 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.21□□□□□ -0.13
Sdc4O35988 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sdc4O35988 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Sdc4O35988 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Sdc4O35988 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms