Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.02□□□□□ -0.32
Cx3cl1O35188 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cl1O35188 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cl1O35188 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cx3cl1O35188 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Gm4804-201ENSMUST00000182234 999 ntBASIC13.02□□□□□ -0.33
Cx3cl1O35188 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Gm29667-201ENSMUST00000190817 490 ntBASIC13.02□□□□□ -0.33
Cx3cl1O35188 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cx3cl1O35188 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.02□□□□□ -0.33
Cx3cl1O35188 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Syt7-204ENSMUST00000223586 1344 ntBASIC13.02□□□□□ -0.33
Cx3cl1O35188 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cx3cl1O35188 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Gm24694-201ENSMUST00000180054 110 ntBASIC13.01□□□□□ -0.33
Cx3cl1O35188 Gm27663-201ENSMUST00000184839 110 ntBASIC13.01□□□□□ -0.33
Cx3cl1O35188 Mir6977-201ENSMUST00000184960 64 ntBASIC13.01□□□□□ -0.33
Cx3cl1O35188 Gm10766-202ENSMUST00000194123 606 ntBASIC13.01□□□□□ -0.33
Cx3cl1O35188 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.01□□□□□ -0.33
Cx3cl1O35188 Gm20445-201ENSMUST00000061905 565 ntBASIC13.01□□□□□ -0.33
Cx3cl1O35188 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.01□□□□□ -0.33
Cx3cl1O35188 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cl1O35188 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13□□□□□ -0.33
Cx3cl1O35188 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Cx3cl1O35188 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Gm15321-201ENSMUST00000121290 288 ntBASIC13□□□□□ -0.33
Cx3cl1O35188 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Gm9522-201ENSMUST00000182394 926 ntBASIC13□□□□□ -0.33
Cx3cl1O35188 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 AC154846.1-201ENSMUST00000226278 862 ntBASIC13□□□□□ -0.33
Cx3cl1O35188 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms