Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Syt7-205ENSMUST00000224135 1557 ntBASIC16.45■□□□□ 0.22
Hdac1O09106 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.45■□□□□ 0.22
Hdac1O09106 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac1O09106 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hdac1O09106 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac1O09106 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac1O09106 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac1O09106 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac1O09106 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hdac1O09106 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.45■□□□□ 0.22
Hdac1O09106 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Hdac1O09106 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.44■□□□□ 0.22
Hdac1O09106 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Hdac1O09106 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hdac1O09106 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.44■□□□□ 0.22
Hdac1O09106 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Hdac1O09106 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.44■□□□□ 0.22
Hdac1O09106 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.44■□□□□ 0.22
Hdac1O09106 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.44■□□□□ 0.22
Hdac1O09106 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.44■□□□□ 0.22
Hdac1O09106 Gm6916-202ENSMUST00000205523 195 ntBASIC16.44■□□□□ 0.22
Hdac1O09106 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.44■□□□□ 0.22
Hdac1O09106 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Dupd1-202ENSMUST00000224735 548 ntBASIC16.44■□□□□ 0.22
Hdac1O09106 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.44■□□□□ 0.22
Hdac1O09106 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Hdac1O09106 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hdac1O09106 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Hdac1O09106 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.43■□□□□ 0.22
Hdac1O09106 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hdac1O09106 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Hdac1O09106 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Hdac1O09106 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Hdac1O09106 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.43■□□□□ 0.22
Hdac1O09106 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.43■□□□□ 0.22
Hdac1O09106 Gm16476-201ENSMUST00000221544 139 ntBASIC16.43■□□□□ 0.22
Hdac1O09106 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hdac1O09106 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.43■□□□□ 0.22
Hdac1O09106 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hdac1O09106 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.43■□□□□ 0.22
Hdac1O09106 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hdac1O09106 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hdac1O09106 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.42■□□□□ 0.22
Hdac1O09106 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hdac1O09106 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.42■□□□□ 0.22
Hdac1O09106 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.42■□□□□ 0.22
Hdac1O09106 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Hdac1O09106 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.42■□□□□ 0.22
Hdac1O09106 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.42■□□□□ 0.22
Hdac1O09106 Gm13365-201ENSMUST00000121188 973 ntBASIC16.42■□□□□ 0.22
Hdac1O09106 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms