Protein–RNA interactions for Protein: O09061

Psmb1, Proteasome subunit beta type-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb1O09061 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.59□□□□□ -0.39
Psmb1O09061 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Psmb1O09061 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Psmb1O09061 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.59□□□□□ -0.39
Psmb1O09061 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Psmb1O09061 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Psmb1O09061 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Psmb1O09061 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Psmb1O09061 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Psmb1O09061 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Psmb1O09061 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.58□□□□□ -0.4
Psmb1O09061 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.58□□□□□ -0.4
Psmb1O09061 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Psmb1O09061 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Psmb1O09061 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Gm37714-201ENSMUST00000194742 342 ntBASIC12.58□□□□□ -0.4
Psmb1O09061 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Gm6745-201ENSMUST00000199216 526 ntBASIC12.58□□□□□ -0.4
Psmb1O09061 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Gm18624-201ENSMUST00000220966 658 ntBASIC12.58□□□□□ -0.4
Psmb1O09061 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Psmb1O09061 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Psmb1O09061 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Psmb1O09061 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Psmb1O09061 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.57□□□□□ -0.4
Psmb1O09061 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.57□□□□□ -0.4
Psmb1O09061 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.57□□□□□ -0.4
Psmb1O09061 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.57□□□□□ -0.4
Psmb1O09061 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Psmb1O09061 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Psmb1O09061 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Psmb1O09061 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Psmb1O09061 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Psmb1O09061 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Psmb1O09061 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms