Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.22□□□□□ -0.13
Trove2O08848 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.22□□□□□ -0.13
Trove2O08848 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trove2O08848 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trove2O08848 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trove2O08848 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.21□□□□□ -0.13
Trove2O08848 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.21□□□□□ -0.13
Trove2O08848 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.21□□□□□ -0.13
Trove2O08848 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.21□□□□□ -0.13
Trove2O08848 Gm25925-201ENSMUST00000158314 306 ntBASIC14.21□□□□□ -0.13
Trove2O08848 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.21□□□□□ -0.13
Trove2O08848 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trove2O08848 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Trove2O08848 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trove2O08848 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trove2O08848 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trove2O08848 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trove2O08848 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trove2O08848 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trove2O08848 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trove2O08848 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trove2O08848 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trove2O08848 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.21□□□□□ -0.14
Trove2O08848 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Trove2O08848 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Gm11779-201ENSMUST00000118541 368 ntBASIC14.2□□□□□ -0.14
Trove2O08848 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 AW822252-206ENSMUST00000208904 237 ntBASIC14.2□□□□□ -0.14
Trove2O08848 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.2□□□□□ -0.14
Trove2O08848 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.2□□□□□ -0.14
Trove2O08848 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.2□□□□□ -0.14
Trove2O08848 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trove2O08848 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trove2O08848 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.2□□□□□ -0.14
Trove2O08848 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trove2O08848 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Trove2O08848 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trove2O08848 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trove2O08848 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trove2O08848 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.19□□□□□ -0.14
Trove2O08848 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Gm15427-201ENSMUST00000117288 531 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.19□□□□□ -0.14
Trove2O08848 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.19□□□□□ -0.14
Trove2O08848 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Gm2451-201ENSMUST00000199447 999 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Gm10290-201ENSMUST00000200451 999 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.19□□□□□ -0.14
Trove2O08848 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.19□□□□□ -0.14
Trove2O08848 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trove2O08848 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trove2O08848 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms