Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.58□□□□□ -0.72
Gm10553J3QPF1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Mir497b-201ENSMUST00000093601 125 ntBASIC10.58□□□□□ -0.72
Gm10553J3QPF1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Gm14452-201ENSMUST00000118680 1632 ntBASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm10553J3QPF1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm21854-201ENSMUST00000179901 471 ntBASIC10.57□□□□□ -0.72
Gm10553J3QPF1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm28760-201ENSMUST00000185995 736 ntBASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm10553J3QPF1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm10553J3QPF1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms