Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Gm12350-201ENSMUST00000121208 462 ntBASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Gm2445-201ENSMUST00000182798 989 ntBASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.61□□□□□ -0.39
Shisa8J3QNX5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shisa8J3QNX5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.6□□□□□ -0.39
Shisa8J3QNX5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shisa8J3QNX5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms