Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdh9F8VPK8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Gm5312-201ENSMUST00000203728 547 ntBASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Gm16476-201ENSMUST00000221544 139 ntBASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Grk6-205ENSMUST00000224653 2976 ntBASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdh9F8VPK8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Gm24158-201ENSMUST00000175263 71 ntBASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdh9F8VPK8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Gm12428-201ENSMUST00000119844 727 ntBASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh9F8VPK8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms