Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cpsf4lE9Q2N0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Gm17795-201ENSMUST00000214505 757 ntBASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Gm9797-201ENSMUST00000052902 613 ntBASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.7□□□□□ -0.54
Cpsf4lE9Q2N0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gm16215-201ENSMUST00000161990 637 ntBASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gm18905-201ENSMUST00000205454 928 ntBASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cpsf4lE9Q2N0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms