Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Gm5878E9PUB3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Gm5878E9PUB3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Mir6990-201ENSMUST00000183724 91 ntBASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm18766-201ENSMUST00000189811 808 ntBASIC10.45□□□□□ -0.74
Gm5878E9PUB3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm45359-201ENSMUST00000210635 427 ntBASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.45□□□□□ -0.74
Gm5878E9PUB3 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Gm5878E9PUB3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Gm8000-201ENSMUST00000188378 592 ntBASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Gm29541-201ENSMUST00000191351 678 ntBASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Gm16476-201ENSMUST00000221544 139 ntBASIC10.44□□□□□ -0.74
Gm5878E9PUB3 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.44□□□□□ -0.74
Gm5878E9PUB3 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Gm5878E9PUB3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms