Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hfm1D3Z4R1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hfm1D3Z4R1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hfm1D3Z4R1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Hfm1D3Z4R1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Gm26185-201ENSMUST00000157692 266 ntBASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hfm1D3Z4R1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hfm1D3Z4R1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Gm4909-201ENSMUST00000118749 794 ntBASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Mir5120-201ENSMUST00000175020 78 ntBASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hfm1D3Z4R1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Gm10434-201ENSMUST00000101158 471 ntBASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Gm11978-201ENSMUST00000122315 466 ntBASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 B9d1os-201ENSMUST00000137010 674 ntBASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Gm38317-201ENSMUST00000195564 343 ntBASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hfm1D3Z4R1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Gm9333-201ENSMUST00000205452 1323 ntBASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Gm8738-201ENSMUST00000172606 329 ntBASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms