Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.39□□□□□ -0.43
Shank1D3YZU1 Gm26461-201ENSMUST00000175064 290 ntBASIC12.39□□□□□ -0.43
Shank1D3YZU1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Gm43822-201ENSMUST00000200285 476 ntBASIC12.39□□□□□ -0.43
Shank1D3YZU1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.39□□□□□ -0.43
Shank1D3YZU1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Gm13385-201ENSMUST00000121089 220 ntBASIC12.39□□□□□ -0.43
Shank1D3YZU1 Gm38671-201ENSMUST00000200573 130 ntBASIC12.39□□□□□ -0.43
Shank1D3YZU1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.39□□□□□ -0.43
Shank1D3YZU1 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.39□□□□□ -0.43
Shank1D3YZU1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shank1D3YZU1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.38□□□□□ -0.43
Shank1D3YZU1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Mir7070-201ENSMUST00000183657 86 ntBASIC12.38□□□□□ -0.43
Shank1D3YZU1 Gm27772-201ENSMUST00000184900 187 ntBASIC12.38□□□□□ -0.43
Shank1D3YZU1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Gm37714-201ENSMUST00000194742 342 ntBASIC12.38□□□□□ -0.43
Shank1D3YZU1 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Snora73a-201ENSMUST00000082453 205 ntBASIC12.38□□□□□ -0.43
Shank1D3YZU1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.38□□□□□ -0.43
Shank1D3YZU1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm12203-201ENSMUST00000118235 598 ntBASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm12209-201ENSMUST00000120089 596 ntBASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm27682-201ENSMUST00000183930 110 ntBASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.37□□□□□ -0.43
Shank1D3YZU1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.37□□□□□ -0.43
Shank1D3YZU1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm26083-201ENSMUST00000157904 193 ntBASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm37466-201ENSMUST00000195692 652 ntBASIC12.37□□□□□ -0.43
Shank1D3YZU1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shank1D3YZU1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms