Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmf1B9EKI3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Gm18062-201ENSMUST00000208020 547 ntBASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Gm18055-201ENSMUST00000208254 547 ntBASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmf1B9EKI3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Gm24447-201ENSMUST00000083977 338 ntBASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmf1B9EKI3 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Gm15770-201ENSMUST00000117498 584 ntBASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.66■□□□□ 0.58
Tmf1B9EKI3 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Gm9899-201ENSMUST00000065519 555 ntBASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Gm5161-201ENSMUST00000075243 853 ntBASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Gm42872-201ENSMUST00000200026 1967 ntBASIC18.66■□□□□ 0.58
Tmf1B9EKI3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmf1B9EKI3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmf1B9EKI3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tmf1B9EKI3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Tmf1B9EKI3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmf1B9EKI3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmf1B9EKI3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmf1B9EKI3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tmf1B9EKI3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms