Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.66□□□□□ -0.54
Col6a4A2AX52 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.66□□□□□ -0.54
Col6a4A2AX52 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Gm43133-201ENSMUST00000197472 463 ntBASIC11.66□□□□□ -0.54
Col6a4A2AX52 Gm43822-201ENSMUST00000200285 476 ntBASIC11.66□□□□□ -0.54
Col6a4A2AX52 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Gm19309-201ENSMUST00000218295 205 ntBASIC11.66□□□□□ -0.54
Col6a4A2AX52 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.66□□□□□ -0.54
Col6a4A2AX52 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a4A2AX52 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Gm1335-201ENSMUST00000121653 386 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 Gm26461-201ENSMUST00000175064 290 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 Gm27331-201ENSMUST00000183705 60 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Gm27682-201ENSMUST00000183930 110 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.65□□□□□ -0.54
Col6a4A2AX52 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Col6a4A2AX52 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Col6a4A2AX52 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.65□□□□□ -0.55
Col6a4A2AX52 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.64□□□□□ -0.55
Col6a4A2AX52 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms