Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ttc39aA2ACP1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ttc39aA2ACP1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ttc39aA2ACP1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ttc39aA2ACP1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 AY702102-202ENSMUST00000194651 1173 ntBASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Gm43094-201ENSMUST00000196549 921 ntBASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ttc39aA2ACP1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ttc39aA2ACP1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Gm15429-201ENSMUST00000151268 798 ntBASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Mir7085-201ENSMUST00000184353 66 ntBASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Gm9899-201ENSMUST00000065519 555 ntBASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ttc39aA2ACP1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ttc39aA2ACP1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms