Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Gm37714-201ENSMUST00000194742 342 ntBASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav12-1A0N8R1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Gm13015-201ENSMUST00000118674 204 ntBASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav12-1A0N8R1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Gm14494-201ENSMUST00000118786 435 ntBASIC11.53□□□□□ -0.56
Trav12-1A0N8R1 Gm15467-201ENSMUST00000120582 445 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms