Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc112A0AUP1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc112A0AUP1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Dupd1-202ENSMUST00000224735 548 ntBASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc112A0AUP1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Gm16476-201ENSMUST00000221544 139 ntBASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms