Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cfap99A0A140LIX9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Mir1938-201ENSMUST00000158746 100 ntBASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Gm28911-201ENSMUST00000188837 117 ntBASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cfap99A0A140LIX9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Gm12341-201ENSMUST00000119724 503 ntBASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Gm5035-201ENSMUST00000215581 927 ntBASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cfap99A0A140LIX9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cfap99A0A140LIX9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cfap99A0A140LIX9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms