Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm44350-201ENSMUST00000197197 138 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44390-201ENSMUST00000197533 144 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44313-201ENSMUST00000198018 138 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44486-201ENSMUST00000198508 138 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44314-201ENSMUST00000199263 138 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44394-201ENSMUST00000199558 138 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44484-201ENSMUST00000199873 138 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44466-201ENSMUST00000200264 138 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44359-201ENSMUST00000200671 138 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm6376-201ENSMUST00000209407 580 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm18246-201ENSMUST00000221023 728 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm6550-201ENSMUST00000187574 993 ntBASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm2272-201ENSMUST00000194903 582 ntBASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms