Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Auts2-212ENSMUST00000178555 309 ntBASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Mir7023-201ENSMUST00000185093 64 ntBASIC14.13□□□□□ -0.15
Gm5538W4VSP6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.13□□□□□ -0.15
Gm5538W4VSP6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Gm15240-201ENSMUST00000118156 720 ntBASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Gm14719-201ENSMUST00000121891 340 ntBASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm5538W4VSP6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm5538W4VSP6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms