Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gm3550W4VSN7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Gm3550W4VSN7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm22065-201ENSMUST00000103753 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm22066-201ENSMUST00000103761 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm24932-201ENSMUST00000103763 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm24115-201ENSMUST00000103799 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm22190-201ENSMUST00000103827 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm22191-201ENSMUST00000103831 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm24721-201ENSMUST00000103849 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm28018-201ENSMUST00000103869 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm26399-201ENSMUST00000103937 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm25349-201ENSMUST00000177728 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm23616-201ENSMUST00000177797 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm25871-201ENSMUST00000177816 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm24752-201ENSMUST00000178240 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm24496-201ENSMUST00000178287 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm25649-201ENSMUST00000178476 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm25548-201ENSMUST00000178681 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm23147-201ENSMUST00000178841 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm26095-201ENSMUST00000179270 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm22171-201ENSMUST00000179283 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm23936-201ENSMUST00000179354 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm22619-201ENSMUST00000179516 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm25255-201ENSMUST00000179579 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm24755-201ENSMUST00000179691 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm26506-201ENSMUST00000179692 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm25086-201ENSMUST00000179931 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm23243-201ENSMUST00000180047 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm24659-201ENSMUST00000180212 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm24169-201ENSMUST00000180244 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm23689-201ENSMUST00000180354 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm27359-201ENSMUST00000184153 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm27785-201ENSMUST00000184268 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm27466-201ENSMUST00000184396 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm27703-201ENSMUST00000184836 110 ntBASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3550W4VSN7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.76□□□□□ -0.53
Gm3550W4VSN7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3550W4VSN7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms