Protein–RNA interactions for Protein: Q9Z2V9

Ccni, Cyclin-I, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcniQ9Z2V9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcniQ9Z2V9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcniQ9Z2V9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CcniQ9Z2V9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CcniQ9Z2V9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gm11764-201ENSMUST00000120221 623 ntBASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gm5682-201ENSMUST00000173402 505 ntBASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gm45167-201ENSMUST00000208007 322 ntBASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcniQ9Z2V9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Auts2-212ENSMUST00000178555 309 ntBASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcniQ9Z2V9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.62□□□□□ -0.39
CcniQ9Z2V9 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms