Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClcnkaQ9WUB7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Gm12428-201ENSMUST00000119844 727 ntBASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Gm38294-201ENSMUST00000192831 381 ntBASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Gm6916-202ENSMUST00000205523 195 ntBASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.78□□□□□ -0.36
ClcnkaQ9WUB7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ClcnkaQ9WUB7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClcnkaQ9WUB7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClcnkaQ9WUB7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClcnkaQ9WUB7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClcnkaQ9WUB7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClcnkaQ9WUB7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClcnkaQ9WUB7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ClcnkaQ9WUB7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.77□□□□□ -0.36
ClcnkaQ9WUB7 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Gm15653-201ENSMUST00000119247 907 ntBASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Gm17837-201ENSMUST00000186435 985 ntBASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Gm6888-201ENSMUST00000221983 706 ntBASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ClcnkaQ9WUB7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
ClcnkaQ9WUB7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms