Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Syt7-205ENSMUST00000224135 1557 ntBASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Clcf1Q9QZM3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Gm15957-201ENSMUST00000118893 974 ntBASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Gm33320-201ENSMUST00000192232 530 ntBASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Gm20445-201ENSMUST00000061905 565 ntBASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Clcf1Q9QZM3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
Clcf1Q9QZM3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Clcf1Q9QZM3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Clcf1Q9QZM3 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.58□□□□□ -0.39
Clcf1Q9QZM3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms