Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Crlf1Q9JM58 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Gm13297-201ENSMUST00000120205 934 ntBASIC11.06□□□□□ -0.64
Crlf1Q9JM58 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.06□□□□□ -0.64
Crlf1Q9JM58 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Crlf1Q9JM58 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Gm14263-201ENSMUST00000117955 746 ntBASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Gm13369-201ENSMUST00000119442 987 ntBASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.05□□□□□ -0.64
Crlf1Q9JM58 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 269.6 ms