Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a2Q9JLR1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Gm13823-201ENSMUST00000119930 345 ntBASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a2Q9JLR1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 AA543401-201ENSMUST00000164248 1269 ntBASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Gm44487-201ENSMUST00000205145 325 ntBASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Sec61a2Q9JLR1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms