Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.3■□□□□ 0.2
Zcchc17Q9ESX4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Gm11803-201ENSMUST00000119966 444 ntBASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Zcchc17Q9ESX4 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zcchc17Q9ESX4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc17Q9ESX4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc17Q9ESX4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc17Q9ESX4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc17Q9ESX4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc17Q9ESX4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zcchc17Q9ESX4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.27■□□□□ 0.2
Zcchc17Q9ESX4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms