Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Gm17330-201ENSMUST00000221047 165 ntBASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.43■□□□□ 0.22
Ube3bQ9ES34 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Gm9002-201ENSMUST00000178437 499 ntBASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Gm38223-201ENSMUST00000194484 695 ntBASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Gm8463-201ENSMUST00000208573 613 ntBASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3bQ9ES34 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Gm6983-201ENSMUST00000214912 628 ntBASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3bQ9ES34 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Ube3bQ9ES34 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ube3bQ9ES34 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms