Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.53□□□□□ -0.24
Rrp8Q9DB85 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.53□□□□□ -0.24
Rrp8Q9DB85 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.53□□□□□ -0.24
Rrp8Q9DB85 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rrp8Q9DB85 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Efs-202ENSMUST00000227037 2540 ntBASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rrp8Q9DB85 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Gm15198-201ENSMUST00000117283 177 ntBASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Gm22331-201ENSMUST00000158066 136 ntBASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Gm18473-201ENSMUST00000220543 868 ntBASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rrp8Q9DB85 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Rrp8Q9DB85 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp8Q9DB85 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp8Q9DB85 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp8Q9DB85 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp8Q9DB85 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp8Q9DB85 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rrp8Q9DB85 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp8Q9DB85 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.5□□□□□ -0.25
Rrp8Q9DB85 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rrp8Q9DB85 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms