Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gm9002-201ENSMUST00000178437 499 ntBASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rsph3bQ9DA80 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Gm24420-201ENSMUST00000176676 59 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Gm43438-201ENSMUST00000198133 379 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.18■□□□□ 0.02
Rsph3bQ9DA80 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Mir497b-201ENSMUST00000093601 125 ntBASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rsph3bQ9DA80 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms