Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Gm6888-201ENSMUST00000221983 706 ntBASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp4bQ9D8B3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.46■□□□□ 0.38
Chmp4bQ9D8B3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chmp4bQ9D8B3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp4bQ9D8B3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp4bQ9D8B3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Gm24420-201ENSMUST00000176676 59 ntBASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Gm17837-201ENSMUST00000186435 985 ntBASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp4bQ9D8B3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms