Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sf3a3Q9D554 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Sf3a3Q9D554 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3a3Q9D554 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3a3Q9D554 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3a3Q9D554 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3a3Q9D554 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3a3Q9D554 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3a3Q9D554 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sf3a3Q9D554 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sf3a3Q9D554 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44357-201ENSMUST00000195897 142 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm19658-201ENSMUST00000196231 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44367-201ENSMUST00000196836 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44350-201ENSMUST00000197197 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44390-201ENSMUST00000197533 144 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm6089-201ENSMUST00000197666 938 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44313-201ENSMUST00000198018 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44486-201ENSMUST00000198508 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44314-201ENSMUST00000199263 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44394-201ENSMUST00000199558 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44484-201ENSMUST00000199873 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44466-201ENSMUST00000200264 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Gm44359-201ENSMUST00000200671 138 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sf3a3Q9D554 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Gm8096-201ENSMUST00000209921 1591 ntBASIC14□□□□□ -0.17
Sf3a3Q9D554 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14□□□□□ -0.17
Sf3a3Q9D554 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms