Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Gm12428-201ENSMUST00000119844 727 ntBASIC15.23■□□□□ 0.03
Cfap53Q9D439 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Gm17837-201ENSMUST00000186435 985 ntBASIC15.23■□□□□ 0.03
Cfap53Q9D439 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.23■□□□□ 0.03
Cfap53Q9D439 Gm6888-201ENSMUST00000221983 706 ntBASIC15.23■□□□□ 0.03
Cfap53Q9D439 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.23■□□□□ 0.03
Cfap53Q9D439 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.23■□□□□ 0.03
Cfap53Q9D439 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cfap53Q9D439 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.22■□□□□ 0.03
Cfap53Q9D439 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cfap53Q9D439 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.22■□□□□ 0.03
Cfap53Q9D439 Gm27618-201ENSMUST00000183671 60 ntBASIC15.22■□□□□ 0.03
Cfap53Q9D439 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Gm44344-201ENSMUST00000200287 129 ntBASIC15.22■□□□□ 0.03
Cfap53Q9D439 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.22■□□□□ 0.03
Cfap53Q9D439 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cfap53Q9D439 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.21■□□□□ 0.03
Cfap53Q9D439 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.21■□□□□ 0.03
Cfap53Q9D439 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.21■□□□□ 0.03
Cfap53Q9D439 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.21■□□□□ 0.03
Cfap53Q9D439 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.21■□□□□ 0.03
Cfap53Q9D439 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cfap53Q9D439 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.02
Cfap53Q9D439 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cfap53Q9D439 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cfap53Q9D439 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.2■□□□□ 0.02
Cfap53Q9D439 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cfap53Q9D439 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cfap53Q9D439 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cfap53Q9D439 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cfap53Q9D439 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cfap53Q9D439 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cfap53Q9D439 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cfap53Q9D439 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.2■□□□□ 0.02
Cfap53Q9D439 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.2■□□□□ 0.02
Cfap53Q9D439 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Cfap53Q9D439 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cfap53Q9D439 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms