Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps33aQ9D2N9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps33aQ9D2N9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps33aQ9D2N9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps33aQ9D2N9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Gm17807-201ENSMUST00000186869 298 ntBASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps33aQ9D2N9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Vps33aQ9D2N9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Vps33aQ9D2N9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Vps33aQ9D2N9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps33aQ9D2N9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps33aQ9D2N9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps33aQ9D2N9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Vps33aQ9D2N9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms