Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.3■□□□□ 0.2
Smc3Q9CW03 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc3Q9CW03 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.29■□□□□ 0.2
Smc3Q9CW03 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.29■□□□□ 0.2
Smc3Q9CW03 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.29■□□□□ 0.2
Smc3Q9CW03 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.28■□□□□ 0.2
Smc3Q9CW03 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.28■□□□□ 0.2
Smc3Q9CW03 Gm29741-201ENSMUST00000192667 421 ntBASIC16.28■□□□□ 0.2
Smc3Q9CW03 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc3Q9CW03 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Gm25287-201ENSMUST00000103846 110 ntBASIC16.27■□□□□ 0.2
Smc3Q9CW03 Gm22918-201ENSMUST00000103855 110 ntBASIC16.27■□□□□ 0.2
Smc3Q9CW03 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Mir6990-201ENSMUST00000183724 91 ntBASIC16.27■□□□□ 0.2
Smc3Q9CW03 Gm18766-201ENSMUST00000189811 808 ntBASIC16.27■□□□□ 0.2
Smc3Q9CW03 Gm43125-201ENSMUST00000201724 730 ntBASIC16.27■□□□□ 0.2
Smc3Q9CW03 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.27■□□□□ 0.2
Smc3Q9CW03 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc3Q9CW03 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Smc3Q9CW03 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc3Q9CW03 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc3Q9CW03 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.27■□□□□ 0.19
Smc3Q9CW03 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc3Q9CW03 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.27■□□□□ 0.19
Smc3Q9CW03 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc3Q9CW03 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc3Q9CW03 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms