Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm4995-201ENSMUST00000117247 432 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm13015-201ENSMUST00000118674 204 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 AA543401-201ENSMUST00000164248 1269 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm18889-201ENSMUST00000174284 929 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm44608-201ENSMUST00000206827 855 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm44771-201ENSMUST00000206975 626 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nipsnap3bQ9CQE1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 BC001981-202ENSMUST00000191393 1545 ntBASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm27494-201ENSMUST00000184735 189 ntBASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nipsnap3bQ9CQE1 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Gm13365-201ENSMUST00000121188 973 ntBASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Gm2445-201ENSMUST00000182798 989 ntBASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Gm8000-201ENSMUST00000188378 592 ntBASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nipsnap3bQ9CQE1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms