Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim11Q99PQ2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Gm26308-201ENSMUST00000157768 69 ntBASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Gm37935-201ENSMUST00000192012 982 ntBASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim11Q99PQ2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Gm25144-201ENSMUST00000179561 110 ntBASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Gm25352-201ENSMUST00000179815 110 ntBASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Gm44719-201ENSMUST00000206404 149 ntBASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Shd-206ENSMUST00000225145 998 ntBASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim11Q99PQ2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Gm23935-201ENSMUST00000102303 57 ntBASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Gm24270-201ENSMUST00000102326 57 ntBASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Gm24245-201ENSMUST00000157318 57 ntBASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Gm27533-201ENSMUST00000183800 152 ntBASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Matn2-206ENSMUST00000228570 2798 ntBASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim11Q99PQ2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms