Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Gm44608-201ENSMUST00000206827 855 ntBASIC13.79□□□□□ -0.2
Trim33Q99PP7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim33Q99PP7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.78□□□□□ -0.2
Trim33Q99PP7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.78□□□□□ -0.2
Trim33Q99PP7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.78□□□□□ -0.2
Trim33Q99PP7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gm6916-202ENSMUST00000205523 195 ntBASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gm46209-201ENSMUST00000217912 553 ntBASIC13.78□□□□□ -0.2
Trim33Q99PP7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.78□□□□□ -0.2
Trim33Q99PP7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.78□□□□□ -0.2
Trim33Q99PP7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim33Q99PP7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.77□□□□□ -0.2
Trim33Q99PP7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim33Q99PP7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim33Q99PP7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Trim33Q99PP7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim33Q99PP7 Acot6-202ENSMUST00000222921 3622 ntBASIC13.77□□□□□ -0.2
Trim33Q99PP7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trim33Q99PP7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trim33Q99PP7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trim33Q99PP7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim33Q99PP7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim33Q99PP7 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.77□□□□□ -0.21
Trim33Q99PP7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim33Q99PP7 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms