Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.96■□□□□ 0.47
Rtn4Q99P72 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Gm46209-201ENSMUST00000217912 553 ntBASIC17.96■□□□□ 0.47
Rtn4Q99P72 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.96■□□□□ 0.47
Rtn4Q99P72 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtn4Q99P72 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rtn4Q99P72 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rtn4Q99P72 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rtn4Q99P72 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rtn4Q99P72 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.95■□□□□ 0.46
Rtn4Q99P72 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.95■□□□□ 0.46
Rtn4Q99P72 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Efs-202ENSMUST00000227037 2540 ntBASIC17.95■□□□□ 0.46
Rtn4Q99P72 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Gm12507-201ENSMUST00000119155 415 ntBASIC17.95■□□□□ 0.46
Rtn4Q99P72 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.95■□□□□ 0.46
Rtn4Q99P72 Gm28180-201ENSMUST00000189608 722 ntBASIC17.95■□□□□ 0.46
Rtn4Q99P72 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Gm7730-201ENSMUST00000212486 454 ntBASIC17.95■□□□□ 0.46
Rtn4Q99P72 Gm7775-201ENSMUST00000218871 853 ntBASIC17.95■□□□□ 0.46
Rtn4Q99P72 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn4Q99P72 Gm37863-201ENSMUST00000194911 1457 ntBASIC17.95■□□□□ 0.46
Rtn4Q99P72 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Gm6222-201ENSMUST00000120787 396 ntBASIC17.94■□□□□ 0.46
Rtn4Q99P72 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.94■□□□□ 0.46
Rtn4Q99P72 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Ermard-209ENSMUST00000226561 1019 ntBASIC17.94■□□□□ 0.46
Rtn4Q99P72 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn4Q99P72 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4Q99P72 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4Q99P72 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.93■□□□□ 0.46
Rtn4Q99P72 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4Q99P72 Gm38262-201ENSMUST00000194760 1382 ntBASIC17.93■□□□□ 0.46
Rtn4Q99P72 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn4Q99P72 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms