Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Gm11439-201ENSMUST00000118598 409 ntBASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm19078-201ENSMUST00000206311 727 ntBASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm45118-201ENSMUST00000208928 825 ntBASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col25a1Q99MQ5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Gm14028-201ENSMUST00000117434 479 ntBASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Gm13689-201ENSMUST00000119360 685 ntBASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Gm6983-201ENSMUST00000214912 628 ntBASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col25a1Q99MQ5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms