Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Gm13365-201ENSMUST00000121188 973 ntBASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Mir1895-201ENSMUST00000122615 79 ntBASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Gm18027-201ENSMUST00000218947 619 ntBASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Gm29741-201ENSMUST00000192667 421 ntBASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdk5rap3Q99LM2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Gm25287-201ENSMUST00000103846 110 ntBASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Gm22918-201ENSMUST00000103855 110 ntBASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Gm9824-201ENSMUST00000178707 561 ntBASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Gm27525-201ENSMUST00000184465 107 ntBASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdk5rap3Q99LM2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms