Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Rubie-203ENSMUST00000227803 2430 ntBASIC13.42□□□□□ -0.26
Cstf3Q99LI7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Gm10253-201ENSMUST00000194270 940 ntBASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.42□□□□□ -0.26
Cstf3Q99LI7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.41□□□□□ -0.26
Cstf3Q99LI7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Gm18027-201ENSMUST00000218947 619 ntBASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Chchd1-203ENSMUST00000224633 557 ntBASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Dupd1-202ENSMUST00000224735 548 ntBASIC13.41□□□□□ -0.26
Cstf3Q99LI7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cstf3Q99LI7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Gm16476-201ENSMUST00000221544 139 ntBASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cstf3Q99LI7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms