Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.01■□□□□ 0.31
RtcbQ99LF4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17■□□□□ 0.31
RtcbQ99LF4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RtcbQ99LF4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RtcbQ99LF4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm11618-201ENSMUST00000117946 267 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm12537-201ENSMUST00000119266 1002 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm12070-201ENSMUST00000119551 1002 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm12671-201ENSMUST00000119978 1002 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm13292-201ENSMUST00000120014 1000 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm12403-201ENSMUST00000121384 959 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm13786-201ENSMUST00000122371 333 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17■□□□□ 0.31
RtcbQ99LF4 Gm16379-201ENSMUST00000161469 348 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm10359-201ENSMUST00000180167 1002 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm12033-201ENSMUST00000180654 1002 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm5559-201ENSMUST00000180755 1002 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm4335-201ENSMUST00000182581 1004 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm8762-201ENSMUST00000193486 339 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17■□□□□ 0.31
RtcbQ99LF4 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17■□□□□ 0.31
RtcbQ99LF4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
RtcbQ99LF4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RtcbQ99LF4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17■□□□□ 0.31
RtcbQ99LF4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RtcbQ99LF4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.99■□□□□ 0.31
RtcbQ99LF4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Gm22323-201ENSMUST00000103832 109 ntBASIC16.99■□□□□ 0.31
RtcbQ99LF4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.99■□□□□ 0.31
RtcbQ99LF4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Mir3547-201ENSMUST00000175461 88 ntBASIC16.99■□□□□ 0.31
RtcbQ99LF4 Gm27320-201ENSMUST00000184892 109 ntBASIC16.99■□□□□ 0.31
RtcbQ99LF4 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.99■□□□□ 0.31
RtcbQ99LF4 Gm16372-201ENSMUST00000073088 450 ntBASIC16.99■□□□□ 0.31
RtcbQ99LF4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.99■□□□□ 0.31
RtcbQ99LF4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RtcbQ99LF4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.98■□□□□ 0.31
RtcbQ99LF4 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.98■□□□□ 0.31
RtcbQ99LF4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RtcbQ99LF4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.98■□□□□ 0.31
RtcbQ99LF4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms