Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm16570-201ENSMUST00000161951 436 ntBASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm38266-201ENSMUST00000194931 421 ntBASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm9823-201ENSMUST00000051212 327 ntBASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm24526-201ENSMUST00000082921 158 ntBASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Gm13350-201ENSMUST00000120519 479 ntBASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Gm26464-201ENSMUST00000157094 305 ntBASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Gm37466-201ENSMUST00000195692 652 ntBASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cstf1Q99LC2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm16177-201ENSMUST00000120728 718 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Mir3547-201ENSMUST00000175461 88 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm7584-201ENSMUST00000175829 940 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm27516-201ENSMUST00000184237 98 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm19184-201ENSMUST00000196798 928 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cstf1Q99LC2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cstf1Q99LC2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms