Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.64□□□□□ -0.39
Lims1Q99JW4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.63□□□□□ -0.39
Lims1Q99JW4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.63□□□□□ -0.39
Lims1Q99JW4 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.63□□□□□ -0.39
Lims1Q99JW4 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.63□□□□□ -0.39
Lims1Q99JW4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Mir497b-201ENSMUST00000093601 125 ntBASIC12.63□□□□□ -0.39
Lims1Q99JW4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lims1Q99JW4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm25287-201ENSMUST00000103846 110 ntBASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm22918-201ENSMUST00000103855 110 ntBASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm4995-201ENSMUST00000117247 432 ntBASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm13365-201ENSMUST00000121188 973 ntBASIC12.62□□□□□ -0.39
Lims1Q99JW4 Mir1895-201ENSMUST00000122615 79 ntBASIC12.62□□□□□ -0.39
Lims1Q99JW4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.62□□□□□ -0.39
Lims1Q99JW4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lims1Q99JW4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lims1Q99JW4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms