Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdk9Q99J95 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Gm27300-201ENSMUST00000184085 97 ntBASIC13.97□□□□□ -0.17
Cdk9Q99J95 Gm27335-201ENSMUST00000184758 97 ntBASIC13.97□□□□□ -0.17
Cdk9Q99J95 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.97□□□□□ -0.17
Cdk9Q99J95 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdk9Q99J95 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.96□□□□□ -0.17
Cdk9Q99J95 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Gm45747-201ENSMUST00000212203 999 ntBASIC13.96□□□□□ -0.17
Cdk9Q99J95 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdk9Q99J95 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.96□□□□□ -0.18
Cdk9Q99J95 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.96□□□□□ -0.18
Cdk9Q99J95 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk9Q99J95 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk9Q99J95 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk9Q99J95 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk9Q99J95 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk9Q99J95 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdk9Q99J95 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cdk9Q99J95 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdk9Q99J95 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdk9Q99J95 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms