Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb6Q91XZ4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Gm15920-201ENSMUST00000118998 402 ntBASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb6Q91XZ4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb6Q91XZ4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb6Q91XZ4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Pcdhb6Q91XZ4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Pcdhb6Q91XZ4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdhb6Q91XZ4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Gm27989-201ENSMUST00000184721 107 ntBASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhb6Q91XZ4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms