Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.25□□□□□ -0.13
Usp3Q91W36 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp3Q91W36 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp3Q91W36 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.25□□□□□ -0.13
Usp3Q91W36 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp3Q91W36 Gm14928-201ENSMUST00000120198 477 ntBASIC14.25□□□□□ -0.13
Usp3Q91W36 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.25□□□□□ -0.13
Usp3Q91W36 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.25□□□□□ -0.13
Usp3Q91W36 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usp3Q91W36 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp3Q91W36 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usp3Q91W36 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.24□□□□□ -0.13
Usp3Q91W36 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.24□□□□□ -0.13
Usp3Q91W36 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp3Q91W36 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Gm22119-201ENSMUST00000175594 99 ntBASIC14.24□□□□□ -0.13
Usp3Q91W36 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Gm27772-201ENSMUST00000184900 187 ntBASIC14.24□□□□□ -0.13
Usp3Q91W36 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.24□□□□□ -0.13
Usp3Q91W36 Gm18018-201ENSMUST00000198273 408 ntBASIC14.24□□□□□ -0.13
Usp3Q91W36 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC14.24□□□□□ -0.13
Usp3Q91W36 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.24□□□□□ -0.13
Usp3Q91W36 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.24□□□□□ -0.13
Usp3Q91W36 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.24□□□□□ -0.13
Usp3Q91W36 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp3Q91W36 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Gm12341-201ENSMUST00000119724 503 ntBASIC14.23□□□□□ -0.13
Usp3Q91W36 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp3Q91W36 Mir6392-201ENSMUST00000184924 108 ntBASIC14.23□□□□□ -0.13
Usp3Q91W36 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.23□□□□□ -0.13
Usp3Q91W36 Gm43094-201ENSMUST00000196549 921 ntBASIC14.23□□□□□ -0.13
Usp3Q91W36 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms